What is pyJASPAR?

pyJASPAR is a python module and a serverless interface to Biopython to query and access JASPAR motifs from different releases of JASPAR database using sqlite3.

Note

This is a serverless SQLite wrapper around the Biopython JASPAR module Bio.motifs.jaspar.db which requires JASPAR MySQL database sever connection details.

Currently, pyJASPAR provides access to JASPAR database releases including:

• JASPAR2024 - http://jaspar.genereg.net/

• JASPAR2022 - http://jaspar2022.genereg.net/

• JASPAR2020 - http://jaspar2020.genereg.net/

• JASPAR2018 - http://jaspar2018.genereg.net/

• JASPAR2016 - http://jaspar2016.genereg.net/

• JASPAR2014 - http://jaspar2014.genereg.net/